mirror of
https://github.com/titanscouting/tra-analysis.git
synced 2024-11-10 15:04:45 +00:00
9f71ab3aad
* reflected doc changes to README.md
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* tra_analysis v 2.1.0-alpha.1
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* changed setup.py to use __version__ from source
added Topic and keywords
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* updated Supported Platforms in README.md
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved required files back to parent
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved security back to parent
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved security back to parent
moved contributing back to parent
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* add PR template
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved to parent folder
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved meta files to .github folder
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* Analysis.py v 3.0.1
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* updated test_analysis for submodules, and added missing numpy import in Sort.py
* fixed item one of Issue #58
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* readded cache searching in postCreateCommand
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* added myself as an author
* feat: created kivy gui boilerplate
* added Kivy to requirements.txt
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* feat: gui with placeholders
* fix: changed config.json path
* migrated docker base image to debian
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* style: spaces to tabs
* migrated to ubuntu
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fixed issues
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fix: docker build?
* fix: use ubuntu bionic
* fix: get kivy installed
* @ltcptgeneral can't spell
* optim dockerfile for not installing unused packages
* install basic stuff while building the container
* use prebuilt image for development
* install pylint on base image
* rename and use new kivy
* tests: added tests for Array and CorrelationTest
Both are not working due to errors
* use new thing
* use 20.04 base
* symlink pip3 to pip
* use pip instead of pip3
* equation.Expression.py v 0.0.1-alpha
added corresponding .pyc to .gitignore
* parser.py v 0.0.2-alpha
* added pyparsing to requirements.txt
* parser v 0.0.4-alpha
* Equation v 0.0.1-alpha
* added Equation to tra_analysis imports
* tests: New unit tests for submoduling (#66)
* feat: created kivy gui boilerplate
* migrated docker base image to debian
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* migrated to ubuntu
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fixed issues
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fix: docker build?
* fix: use ubuntu bionic
* fix: get kivy installed
* @ltcptgeneral can't spell
* optim dockerfile for not installing unused packages
* install basic stuff while building the container
* use prebuilt image for development
* install pylint on base image
* rename and use new kivy
* tests: added tests for Array and CorrelationTest
Both are not working due to errors
* fix: Array no longer has *args and CorrelationTest functions no longer have self in the arguments
* use new thing
* use 20.04 base
* symlink pip3 to pip
* use pip instead of pip3
* tra_analysis v 2.1.0-alpha.2
SVM v 1.0.1
added unvalidated SVM unit tests
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fixed version number
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* tests: added tests for ClassificationMetric
* partially fixed and commented out svm unit tests
* fixed some SVM unit tests
* added installing pytest to devcontainer.json
* fix: small fixes to KNN
Namely, removing self from parameters and passing correct arguments to KNeighborsClassifier constructor
* fix, test: Added tests for KNN and NaiveBayes.
Also made some small fixes in KNN, NaiveBayes, and RegressionMetric
* test: finished unit tests except for StatisticalTest
Also made various small fixes and style changes
* StatisticalTest v 1.0.1
* fixed RegressionMetric unit test
temporarily disabled CorrelationTest unit tests
* tra_analysis v 2.1.0-alpha.3
* readded __all__
* fix: floating point issues in unit tests for CorrelationTest
Co-authored-by: AGawde05 <agawde05@gmail.com>
Co-authored-by: ltcptgeneral <learthurgo@gmail.com>
Co-authored-by: Dev Singh <dev@devksingh.com>
Co-authored-by: jzpan1 <panzhenyu2014@gmail.com>
* fixed depreciated escape sequences
* ficed tests, indent, import in test_analysis
* changed version to 3.0.0
added backwards compatibility
* ficed pytest install in container
* removed GUI changes
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* incremented version to rc.1 (release candidate 1)
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* fixed NaiveBayes __changelog__
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* fix: __setitem__ == to single =
* Array v 1.0.1
* Revert "Array v 1.0.1"
This reverts commit 59783b79f7
.
* Array v 1.0.1
* Array.py v 1.0.2
added more Array unit tests
* cleaned .gitignore
tra_analysis v 3.0.0-rc2
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* added *.pyc to gitignore
finished subdividing test_analysis
* feat: gui layout + basic func
* Froze and removed superscript (data-analysis)
* remove data-analysis deps install for devcontainer
* tukey pairwise comparison and multicomparison but no critical q-values
* quick patch for devcontainer.json
* better fix for devcontainer.json
* fixed some styling in StatisticalTest
removed print statement in StatisticalTest unit tests
* update analysis tests to be more effecient
* don't use loop for test_nativebayes
* removed useless secondary docker files
* tra-analysis v 3.0.0
Co-authored-by: James Pan <panzhenyu2014@gmail.com>
Co-authored-by: AGawde05 <agawde05@gmail.com>
Co-authored-by: zpan1 <72054510+zpan1@users.noreply.github.com>
Co-authored-by: Dev Singh <dev@devksingh.com>
Co-authored-by: = <=>
Co-authored-by: Dev Singh <dsingh@imsa.edu>
Co-authored-by: zpan1 <zpan@imsa.edu>
106 lines
5.4 KiB
Python
106 lines
5.4 KiB
Python
try:
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import numpy as np
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has_numpy = True
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except ImportError:
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import math
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has_numpy = False
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try:
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import scipy.constants
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has_scipy = True
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except ImportError:
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has_scipy = False
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import operator as op
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from .similar import sim, nsim, gsim, lsim
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def equation_extend(core):
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def product(*args):
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if len(args) == 1 and has_numpy:
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return np.prod(args[0])
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else:
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return reduce(op.mul,args,1)
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def sumargs(*args):
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if len(args) == 1:
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return sum(args[0])
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else:
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return sum(args)
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core.addOp('+',"({0:s} + {1:s})","\\left({0:s} + {1:s}\\right)",False,3,op.add)
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core.addOp('-',"({0:s} - {1:s})","\\left({0:s} - {1:s}\\right)",False,3,op.sub)
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core.addOp('*',"({0:s} * {1:s})","\\left({0:s} \\times {1:s}\\right)",False,2,op.mul)
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core.addOp('/',"({0:s} / {1:s})","\\frac{{{0:s}}}{{{1:s}}}",False,2,op.truediv)
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core.addOp('%',"({0:s} % {1:s})","\\left({0:s} \\bmod {1:s}\\right)",False,2,op.mod)
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core.addOp('^',"({0:s} ^ {1:s})","{0:s}^{{{1:s}}}",False,1,op.pow)
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core.addOp('**',"({0:s} ^ {1:s})","{0:s}^{{{1:s}}}",False,1,op.pow)
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core.addOp('&',"({0:s} & {1:s})","\\left({0:s} \\land {1:s}\\right)",False,4,op.and_)
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core.addOp('|',"({0:s} | {1:s})","\\left({0:s} \\lor {1:s}\\right)",False,4,op.or_)
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core.addOp('</>',"({0:s} </> {1:s})","\\left({0:s} \\oplus {1:s}\\right)",False,4,op.xor)
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core.addOp('&|',"({0:s} </> {1:s})","\\left({0:s} \\oplus {1:s}\\right)",False,4,op.xor)
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core.addOp('|&',"({0:s} </> {1:s})","\\left({0:s} \\oplus {1:s}\\right)",False,4,op.xor)
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core.addOp('==',"({0:s} == {1:s})","\\left({0:s} = {1:s}\\right)",False,5,op.eq)
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core.addOp('=',"({0:s} == {1:s})","\\left({0:s} = {1:s}\\right)",False,5,op.eq)
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core.addOp('~',"({0:s} ~ {1:s})","\\left({0:s} \\approx {1:s}\\right)",False,5,sim)
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core.addOp('!~',"({0:s} !~ {1:s})","\\left({0:s} \\not\\approx {1:s}\\right)",False,5,nsim)
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core.addOp('!=',"({0:s} != {1:s})","\\left({0:s} \\neg {1:s}\\right)",False,5,op.ne)
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core.addOp('<>',"({0:s} != {1:s})","\\left({0:s} \\neg {1:s}\\right)",False,5,op.ne)
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core.addOp('><',"({0:s} != {1:s})","\\left({0:s} \\neg {1:s}\\right)",False,5,op.ne)
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core.addOp('<',"({0:s} < {1:s})","\\left({0:s} < {1:s}\\right)",False,5,op.lt)
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core.addOp('>',"({0:s} > {1:s})","\\left({0:s} > {1:s}\\right)",False,5,op.gt)
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core.addOp('<=',"({0:s} <= {1:s})","\\left({0:s} \\leq {1:s}\\right)",False,5,op.le)
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core.addOp('>=',"({0:s} >= {1:s})","\\left({0:s} \\geq {1:s}\\right)",False,5,op.ge)
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core.addOp('=<',"({0:s} <= {1:s})","\\left({0:s} \\leq {1:s}\\right)",False,5,op.le)
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core.addOp('=>',"({0:s} >= {1:s})","\\left({0:s} \\geq {1:s}\\right)",False,5,op.ge)
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core.addOp('<~',"({0:s} <~ {1:s})","\\left({0:s} \lessapprox {1:s}\\right)",False,5,lsim)
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core.addOp('>~',"({0:s} >~ {1:s})","\\left({0:s} \\gtrapprox {1:s}\\right)",False,5,gsim)
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core.addOp('~<',"({0:s} <~ {1:s})","\\left({0:s} \lessapprox {1:s}\\right)",False,5,lsim)
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core.addOp('~>',"({0:s} >~ {1:s})","\\left({0:s} \\gtrapprox {1:s}\\right)",False,5,gsim)
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core.addUnaryOp('!',"(!{0:s})","\\neg{0:s}",op.not_)
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core.addUnaryOp('-',"-{0:s}","-{0:s}",op.neg)
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core.addFn('abs',"abs({0:s})","\\left|{0:s}\\right|",1,op.abs)
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core.addFn('sum',"sum({0:s})","\\sum\\left({0:s}\\right)",'+',sumargs)
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core.addFn('prod',"prod({0:s})","\\prod\\left({0:s}\\right)",'+',product)
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if has_numpy:
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core.addFn('floor',"floor({0:s})","\\lfloor {0:s} \\rfloor",1,np.floor)
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core.addFn('ceil',"ceil({0:s})","\\lceil {0:s} \\rceil",1,np.ceil)
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core.addFn('round',"round({0:s})","\\lfloor {0:s} \\rceil",1,np.round)
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core.addFn('sin',"sin({0:s})","\\sin\\left({0:s}\\right)",1,np.sin)
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core.addFn('cos',"cos({0:s})","\\cos\\left({0:s}\\right)",1,np.cos)
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core.addFn('tan',"tan({0:s})","\\tan\\left({0:s}\\right)",1,np.tan)
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core.addFn('re',"re({0:s})","\\Re\\left({0:s}\\right)",1,np.real)
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core.addFn('im',"re({0:s})","\\Im\\left({0:s}\\right)",1,np.imag)
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core.addFn('sqrt',"sqrt({0:s})","\\sqrt{{{0:s}}}",1,np.sqrt)
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core.addConst("pi",np.pi)
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core.addConst("e",np.e)
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core.addConst("Inf",np.Inf)
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core.addConst("NaN",np.NaN)
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else:
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core.addFn('floor',"floor({0:s})","\\lfloor {0:s} \\rfloor",1,math.floor)
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core.addFn('ceil',"ceil({0:s})","\\lceil {0:s} \\rceil",1,math.ceil)
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core.addFn('round',"round({0:s})","\\lfloor {0:s} \\rceil",1,round)
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core.addFn('sin',"sin({0:s})","\\sin\\left({0:s}\\right)",1,math.sin)
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core.addFn('cos',"cos({0:s})","\\cos\\left({0:s}\\right)",1,math.cos)
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core.addFn('tan',"tan({0:s})","\\tan\\left({0:s}\\right)",1,math.tan)
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core.addFn('re',"re({0:s})","\\Re\\left({0:s}\\right)",1,complex.real)
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core.addFn('im',"re({0:s})","\\Im\\left({0:s}\\right)",1,complex.imag)
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core.addFn('sqrt',"sqrt({0:s})","\\sqrt{{{0:s}}}",1,math.sqrt)
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core.addConst("pi",math.pi)
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core.addConst("e",math.e)
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core.addConst("Inf",float("Inf"))
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core.addConst("NaN",float("NaN"))
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if has_scipy:
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core.addConst("h",scipy.constants.h)
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core.addConst("hbar",scipy.constants.hbar)
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core.addConst("m_e",scipy.constants.m_e)
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core.addConst("m_p",scipy.constants.m_p)
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core.addConst("m_n",scipy.constants.m_n)
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core.addConst("c",scipy.constants.c)
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core.addConst("N_A",scipy.constants.N_A)
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core.addConst("mu_0",scipy.constants.mu_0)
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core.addConst("eps_0",scipy.constants.epsilon_0)
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core.addConst("k",scipy.constants.k)
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core.addConst("G",scipy.constants.G)
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core.addConst("g",scipy.constants.g)
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core.addConst("q",scipy.constants.e)
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core.addConst("R",scipy.constants.R)
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core.addConst("sigma",scipy.constants.e)
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core.addConst("Rb",scipy.constants.Rydberg) |