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65 lines
2.3 KiB
Protocol Buffer
65 lines
2.3 KiB
Protocol Buffer
// Copyright 2016 Google Inc.
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//
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// Licensed under the Apache License, Version 2.0 (the "License");
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// you may not use this file except in compliance with the License.
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// You may obtain a copy of the License at
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//
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// http://www.apache.org/licenses/LICENSE-2.0
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//
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// Unless required by applicable law or agreed to in writing, software
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// distributed under the License is distributed on an "AS IS" BASIS,
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// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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// See the License for the specific language governing permissions and
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// limitations under the License.
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syntax = "proto3";
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package google.genomics.v1;
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import "google/api/annotations.proto";
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import "google/genomics/v1/readgroup.proto";
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import "google/protobuf/struct.proto";
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option cc_enable_arenas = true;
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option go_package = "google.golang.org/genproto/googleapis/genomics/v1;genomics";
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option java_multiple_files = true;
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option java_outer_classname = "ReadGroupSetProto";
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option java_package = "com.google.genomics.v1";
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// A read group set is a logical collection of read groups, which are
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// collections of reads produced by a sequencer. A read group set typically
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// models reads corresponding to one sample, sequenced one way, and aligned one
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// way.
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//
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// * A read group set belongs to one dataset.
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// * A read group belongs to one read group set.
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// * A read belongs to one read group.
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//
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// For more genomics resource definitions, see [Fundamentals of Google
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// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
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message ReadGroupSet {
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// The server-generated read group set ID, unique for all read group sets.
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string id = 1;
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// The dataset to which this read group set belongs.
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string dataset_id = 2;
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// The reference set to which the reads in this read group set are aligned.
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string reference_set_id = 3;
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// The read group set name. By default this will be initialized to the sample
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// name of the sequenced data contained in this set.
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string name = 4;
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// The filename of the original source file for this read group set, if any.
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string filename = 5;
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// The read groups in this set. There are typically 1-10 read groups in a read
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// group set.
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repeated ReadGroup read_groups = 6;
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// A map of additional read group set information.
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map<string, google.protobuf.ListValue> info = 7;
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}
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