tra-analysis/analysis-master/tra_analysis/__init__.py
Arthur Lu 60beaa4563 tra-analysis v 3.0.0 aggregate PR (#73)
* reflected doc changes to README.md

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* tra_analysis v 2.1.0-alpha.1

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* changed setup.py to use __version__ from source
added Topic and keywords

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* updated Supported Platforms in README.md

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* moved required files back to parent

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* moved security back to parent

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* moved security back to parent
moved contributing back to parent

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* add PR template

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* moved to parent folder

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* moved meta files to .github folder

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* Analysis.py v 3.0.1

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* updated test_analysis for submodules, and added missing numpy import in Sort.py

* fixed item one of Issue #58

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* readded cache searching in postCreateCommand

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* added myself as an author

* feat: created kivy gui boilerplate

* added Kivy to requirements.txt

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* feat: gui with placeholders

* fix: changed config.json path

* migrated docker base image to debian

Signed-off-by: ltcptgeneral <learthurgo@gmail.com>

* style: spaces to tabs

* migrated to ubuntu

Signed-off-by: ltcptgeneral <learthurgo@gmail.com>

* fixed issues

Signed-off-by: ltcptgeneral <learthurgo@gmail.com>

* fix: docker build?

* fix: use ubuntu bionic

* fix: get kivy installed

* @ltcptgeneral can't spell

* optim dockerfile for not installing unused packages

* install basic stuff while building the container

* use prebuilt image for development

* install pylint on base image

* rename and use new kivy

* tests: added tests for Array and CorrelationTest

Both are not working due to errors

* use new thing

* use 20.04 base

* symlink pip3 to pip

* use pip instead of pip3

* equation.Expression.py v 0.0.1-alpha
added corresponding .pyc to .gitignore

* parser.py v 0.0.2-alpha

* added pyparsing to requirements.txt

* parser v 0.0.4-alpha

* Equation v 0.0.1-alpha

* added Equation to tra_analysis imports

* tests: New unit tests for submoduling (#66)

* feat: created kivy gui boilerplate

* migrated docker base image to debian

Signed-off-by: ltcptgeneral <learthurgo@gmail.com>

* migrated to ubuntu

Signed-off-by: ltcptgeneral <learthurgo@gmail.com>

* fixed issues

Signed-off-by: ltcptgeneral <learthurgo@gmail.com>

* fix: docker build?

* fix: use ubuntu bionic

* fix: get kivy installed

* @ltcptgeneral can't spell

* optim dockerfile for not installing unused packages

* install basic stuff while building the container

* use prebuilt image for development

* install pylint on base image

* rename and use new kivy

* tests: added tests for Array and CorrelationTest

Both are not working due to errors

* fix: Array no longer has *args and CorrelationTest functions no longer have self in the arguments

* use new thing

* use 20.04 base

* symlink pip3 to pip

* use pip instead of pip3

* tra_analysis v 2.1.0-alpha.2
SVM v 1.0.1
added unvalidated SVM unit tests

Signed-off-by: ltcptgeneral <learthurgo@gmail.com>

* fixed version number

Signed-off-by: ltcptgeneral <learthurgo@gmail.com>

* tests: added tests for ClassificationMetric

* partially fixed and commented out svm unit tests

* fixed some SVM unit tests

* added installing pytest to devcontainer.json

* fix: small fixes to KNN

Namely, removing self from parameters and passing correct arguments to KNeighborsClassifier constructor

* fix, test: Added tests for KNN and NaiveBayes.

Also made some small fixes in KNN, NaiveBayes, and RegressionMetric

* test: finished unit tests except for StatisticalTest

Also made various small fixes and style changes

* StatisticalTest v 1.0.1

* fixed RegressionMetric unit test
temporarily disabled CorrelationTest unit tests

* tra_analysis v 2.1.0-alpha.3

* readded __all__

* fix: floating point issues in unit tests for CorrelationTest

Co-authored-by: AGawde05 <agawde05@gmail.com>
Co-authored-by: ltcptgeneral <learthurgo@gmail.com>
Co-authored-by: Dev Singh <dev@devksingh.com>
Co-authored-by: jzpan1 <panzhenyu2014@gmail.com>

* fixed depreciated escape sequences

* ficed tests, indent, import in test_analysis

* changed version to 3.0.0
added backwards compatibility

* ficed pytest install in container

* removed GUI changes

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* incremented version to rc.1 (release candidate 1)

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* fixed NaiveBayes __changelog__

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* fix: __setitem__  == to single =

* Array v 1.0.1

* Revert "Array v 1.0.1"

This reverts commit 59783b79f7.

* Array v 1.0.1

* Array.py v 1.0.2
added more Array unit tests

* cleaned .gitignore
tra_analysis v 3.0.0-rc2

Signed-off-by: Arthur Lu <learthurgo@gmail.com>

* added *.pyc to gitignore
finished subdividing test_analysis

* feat: gui layout + basic func

* Froze and removed superscript (data-analysis)

* remove data-analysis deps install for devcontainer

* tukey pairwise comparison and multicomparison but no critical q-values

* quick patch for devcontainer.json

* better fix for devcontainer.json

* fixed some styling in StatisticalTest
removed print statement in StatisticalTest unit tests

* update analysis tests to be more effecient

* don't use loop for test_nativebayes

* removed useless secondary docker files

* tra-analysis v 3.0.0

Co-authored-by: James Pan <panzhenyu2014@gmail.com>
Co-authored-by: AGawde05 <agawde05@gmail.com>
Co-authored-by: zpan1 <72054510+zpan1@users.noreply.github.com>
Co-authored-by: Dev Singh <dev@devksingh.com>
Co-authored-by: = <=>
Co-authored-by: Dev Singh <dsingh@imsa.edu>
Co-authored-by: zpan1 <zpan@imsa.edu>
2021-04-28 19:33:50 -05:00

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Python

# Titan Robotics Team 2022: tra_analysis package
# Written by Arthur Lu, Jacob Levine, Dev Singh, and James Pan
# Notes:
# this should be imported as a python package using 'import tra_analysis'
# this should be included in the local directory or environment variable
# this module has been optimized for multhreaded computing
# current benchmark of optimization: 1.33 times faster
# setup:
__version__ = "3.0.0"
# changelog should be viewed using print(analysis.__changelog__)
__changelog__ = """changelog:
3.0.0:
- incremented version to release 3.0.0
3.0.0-rc2:
- fixed __changelog__
- fixed __all__ of Analysis, Array, ClassificationMetric, CorrelationTest, RandomForest, Sort, SVM
- populated __all__
3.0.0-alpha.4:
- changed version to 3 because of significant changes
- added backwards compatibility import of analysis
2.1.0-alpha.3:
- fixed indentation in meta data
2.1.0-alpha.2:
- updated SVM import
2.1.0-alpha.1:
- moved multiple submodules under analysis to their own modules/files
- added header, __version__, __changelog__, __author__, __all__ (unpopulated)
"""
__author__ = (
"Arthur Lu <learthurgo@gmail.com>",
"Jacob Levine <jlevine@imsa.edu>",
"Dev Singh <dev@devksingh.com>",
"James Pan <zpan@imsa.edu>"
)
__all__ = [
"Analysis",
"Array",
"ClassificationMetric",
"CorrelationTest",
"Expression",
"Fit",
"KNN",
"NaiveBayes",
"RandomForest",
"RegressionMetric",
"Sort",
"StatisticalTest",
"SVM"
]
from . import Analysis as Analysis
from . import Analysis as analysis
from .Array import Array
from .ClassificationMetric import ClassificationMetric
from . import CorrelationTest
from .equation import Expression
from . import Fit
from . import KNN
from . import NaiveBayes
from . import RandomForest
from .RegressionMetric import RegressionMetric
from . import Sort
from . import StatisticalTest
from . import SVM