* reflected doc changes to README.md
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* tra_analysis v 2.1.0-alpha.1
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* changed setup.py to use __version__ from source
added Topic and keywords
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* updated Supported Platforms in README.md
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved required files back to parent
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved security back to parent
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved security back to parent
moved contributing back to parent
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* add PR template
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved to parent folder
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* moved meta files to .github folder
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* Analysis.py v 3.0.1
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* updated test_analysis for submodules, and added missing numpy import in Sort.py
* fixed item one of Issue #58
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* readded cache searching in postCreateCommand
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* added myself as an author
* feat: created kivy gui boilerplate
* added Kivy to requirements.txt
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* feat: gui with placeholders
* fix: changed config.json path
* migrated docker base image to debian
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* style: spaces to tabs
* migrated to ubuntu
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fixed issues
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fix: docker build?
* fix: use ubuntu bionic
* fix: get kivy installed
* @ltcptgeneral can't spell
* optim dockerfile for not installing unused packages
* install basic stuff while building the container
* use prebuilt image for development
* install pylint on base image
* rename and use new kivy
* tests: added tests for Array and CorrelationTest
Both are not working due to errors
* use new thing
* use 20.04 base
* symlink pip3 to pip
* use pip instead of pip3
* equation.Expression.py v 0.0.1-alpha
added corresponding .pyc to .gitignore
* parser.py v 0.0.2-alpha
* added pyparsing to requirements.txt
* parser v 0.0.4-alpha
* Equation v 0.0.1-alpha
* added Equation to tra_analysis imports
* tests: New unit tests for submoduling (#66)
* feat: created kivy gui boilerplate
* migrated docker base image to debian
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* migrated to ubuntu
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fixed issues
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fix: docker build?
* fix: use ubuntu bionic
* fix: get kivy installed
* @ltcptgeneral can't spell
* optim dockerfile for not installing unused packages
* install basic stuff while building the container
* use prebuilt image for development
* install pylint on base image
* rename and use new kivy
* tests: added tests for Array and CorrelationTest
Both are not working due to errors
* fix: Array no longer has *args and CorrelationTest functions no longer have self in the arguments
* use new thing
* use 20.04 base
* symlink pip3 to pip
* use pip instead of pip3
* tra_analysis v 2.1.0-alpha.2
SVM v 1.0.1
added unvalidated SVM unit tests
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* fixed version number
Signed-off-by: ltcptgeneral <learthurgo@gmail.com>
* tests: added tests for ClassificationMetric
* partially fixed and commented out svm unit tests
* fixed some SVM unit tests
* added installing pytest to devcontainer.json
* fix: small fixes to KNN
Namely, removing self from parameters and passing correct arguments to KNeighborsClassifier constructor
* fix, test: Added tests for KNN and NaiveBayes.
Also made some small fixes in KNN, NaiveBayes, and RegressionMetric
* test: finished unit tests except for StatisticalTest
Also made various small fixes and style changes
* StatisticalTest v 1.0.1
* fixed RegressionMetric unit test
temporarily disabled CorrelationTest unit tests
* tra_analysis v 2.1.0-alpha.3
* readded __all__
* fix: floating point issues in unit tests for CorrelationTest
Co-authored-by: AGawde05 <agawde05@gmail.com>
Co-authored-by: ltcptgeneral <learthurgo@gmail.com>
Co-authored-by: Dev Singh <dev@devksingh.com>
Co-authored-by: jzpan1 <panzhenyu2014@gmail.com>
* fixed depreciated escape sequences
* ficed tests, indent, import in test_analysis
* changed version to 3.0.0
added backwards compatibility
* ficed pytest install in container
* removed GUI changes
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* incremented version to rc.1 (release candidate 1)
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* fixed NaiveBayes __changelog__
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* fix: __setitem__ == to single =
* Array v 1.0.1
* Revert "Array v 1.0.1"
This reverts commit 59783b79f7.
* Array v 1.0.1
* Array.py v 1.0.2
added more Array unit tests
* cleaned .gitignore
tra_analysis v 3.0.0-rc2
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* added *.pyc to gitignore
finished subdividing test_analysis
* feat: gui layout + basic func
* Froze and removed superscript (data-analysis)
* remove data-analysis deps install for devcontainer
* tukey pairwise comparison and multicomparison but no critical q-values
* quick patch for devcontainer.json
* better fix for devcontainer.json
* fixed some styling in StatisticalTest
removed print statement in StatisticalTest unit tests
* update analysis tests to be more effecient
* don't use loop for test_nativebayes
* removed useless secondary docker files
* tra-analysis v 3.0.0
Co-authored-by: James Pan <panzhenyu2014@gmail.com>
Co-authored-by: AGawde05 <agawde05@gmail.com>
Co-authored-by: zpan1 <72054510+zpan1@users.noreply.github.com>
Co-authored-by: Dev Singh <dev@devksingh.com>
Co-authored-by: = <=>
Co-authored-by: Dev Singh <dsingh@imsa.edu>
Co-authored-by: zpan1 <zpan@imsa.edu>
* chore: add pylint to devcontainer
Signed-off-by: Dev Singh <dev@devksingh.com>
* feat: init LSC fitting
cuda and cpu-based LSC fitting using cupy and numpy
Signed-off-by: Dev Singh <dev@devksingh.com>
* docs: add changelog entry and module to class list
Signed-off-by: Dev Singh <dev@devksingh.com>
* docs: fix typo in comment
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix: only import cupy if cuda available
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix: move to own file, abandon cupy
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix: remove numba dep
Signed-off-by: Dev Singh <dev@devksingh.com>
* deps: remove cupy dep
Signed-off-by: Dev Singh <dev@devksingh.com>
* feat: add tests
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix: correct indentation
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix: variable names
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix: add self when refering to coords
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix: numpy ordering
Signed-off-by: Dev Singh <dev@devksingh.com>
* docs: remove version bump, nomaintain
add notice that module is not actively maintained, may be removed in future release
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix: remove hyperfit as not being impled
Signed-off-by: Dev Singh <dev@devksingh.com>
* Create python-publish.yml
* populated publish-analysis.yml
moved legacy versions of analysis to seperate subfolder
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* attempt to fix issue with publish action
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* another attempt o fix publish-analysis.yml
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* this should work now
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* pypa can't take just one package so i'm trying all
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* this should totally work now
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* trying removing custom dir
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* rename analysis to tra_analysis, bump version to 2.0.0
* remove old packages which are already on github releases
* remove pycache
* removed ipynb_checkpoints
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* build
* do the dir thing
* trying removing custom dir
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
Signed-off-by: Dev Singh <dev@devksingh.com>
* rename analysis to tra_analysis, bump version to 2.0.0
Signed-off-by: Dev Singh <dev@devksingh.com>
* remove old packages which are already on github releases
Signed-off-by: Dev Singh <dev@devksingh.com>
* remove pycache
Signed-off-by: Dev Singh <dev@devksingh.com>
* build
Signed-off-by: Dev Singh <dev@devksingh.com>
* removed ipynb_checkpoints
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
Signed-off-by: Dev Singh <dev@devksingh.com>
* do the dir thing
Signed-off-by: Dev Singh <dev@devksingh.com>
* Revert "do the dir thing"
This reverts commit 2eb7ffca8d.
* correct dir
* set correct yaml positions
Signed-off-by: Dev Singh <dev@devksingh.com>
* attempt to set correct dir
Signed-off-by: Dev Singh <dev@devksingh.com>
* run on tags only
Signed-off-by: Dev Singh <dev@devksingh.com>
* remove all caches from vcs
Signed-off-by: Dev Singh <dev@devksingh.com>
* bump version for testing
Signed-off-by: Dev Singh <dev@devksingh.com>
* remove broke build
Signed-off-by: Dev Singh <dev@devksingh.com>
* dont upload dists to github
Signed-off-by: Dev Singh <dev@devksingh.com>
* bump to 2.0.2 for testing
Signed-off-by: Dev Singh <dev@devksingh.com>
* fix yaml
Signed-off-by: Dev Singh <dev@devksingh.com>
* update docs
Signed-off-by: Dev Singh <dev@devksingh.com>
* add to readme
Signed-off-by: Dev Singh <dev@devksingh.com>
* run only on master
Signed-off-by: Dev Singh <dev@devksingh.com>
Co-authored-by: Arthur Lu <learthurgo@gmail.com>
Co-authored-by: Dev Singh <dsingh@CentaurusRidge.localdomain>
* added config.json
removed old config files
Signed-off-by: Arthur <learthurgo@gmail.com>
* superscript.py v 0.0.6.000
Signed-off-by: Arthur <learthurgo@gmail.com>
* changed data.py
Signed-off-by: Arthur <learthurgo@gmail.com>
* changes to config.json
Signed-off-by: Arthur <learthurgo@gmail.com>
* removed cells from visualize_pit.py
Signed-off-by: Arthur <learthurgo@gmail.com>
* more changes to visualize_pit.py
Signed-off-by: Arthur <learthurgo@gmail.com>
* added analysis-master/metrics/__pycache__ to git ignore
moved pit configs in config.json to the borrom
superscript.py v 0.0.6.001
Signed-off-by: Arthur <learthurgo@gmail.com>
* removed old database key
Signed-off-by: Arthur <learthurgo@gmail.com>
* adjusted config files
Signed-off-by: Arthur <learthurgo@gmail.com>
* Delete config-pop.json
* fixed .gitignore
Signed-off-by: Arthur <learthurgo@gmail.com>
* analysis.py 1.2.1.003
added team kv pair to config.json
Signed-off-by: Arthur <learthurgo@gmail.com>
* superscript.py v 0.0.6.002
Signed-off-by: Arthur <learthurgo@gmail.com>
* finished app.py API
made minute changes to parentheses use in various packages
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* bug fixes in app.py
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* bug fixes in app.py
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* made changes to .gitignore
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* made changes to .gitignore
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* deleted a __pycache__ folder from metrics
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* more changes to .gitignore
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* additions to app.py
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* renamed app.py to api.py
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* removed extranneous files
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* renamed api.py to tra.py
removed rest api calls from tra.py
* renamed api.py to tra.py
removed rest api calls from tra.py
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* removed flask import from tra.py
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* changes to devcontainer.json
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
* fixed unit tests to be correct
removed some tests regressions because of potential function overflow
removed trueskill unit test because of slight deviation chance
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
renamed pythonpackage.yml to ut-analysis.yml
populated ut-analysis.yml
fixed spelling
added ut-superscript.py
Signed-off-by: Arthur Lu <learthurgo@gmail.com>
