tra-analysis/analysis-master/tra_analysis/RandomForest.py

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tra-analysis v 3.0.0 aggregate PR (#73) * reflected doc changes to README.md Signed-off-by: Arthur Lu <learthurgo@gmail.com> * tra_analysis v 2.1.0-alpha.1 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * changed setup.py to use __version__ from source added Topic and keywords Signed-off-by: Arthur Lu <learthurgo@gmail.com> * updated Supported Platforms in README.md Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved required files back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved security back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved security back to parent moved contributing back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * add PR template Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved to parent folder Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved meta files to .github folder Signed-off-by: Arthur Lu <learthurgo@gmail.com> * Analysis.py v 3.0.1 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * updated test_analysis for submodules, and added missing numpy import in Sort.py * fixed item one of Issue #58 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * readded cache searching in postCreateCommand Signed-off-by: Arthur Lu <learthurgo@gmail.com> * added myself as an author * feat: created kivy gui boilerplate * added Kivy to requirements.txt Signed-off-by: Arthur Lu <learthurgo@gmail.com> * feat: gui with placeholders * fix: changed config.json path * migrated docker base image to debian Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * style: spaces to tabs * migrated to ubuntu Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed issues Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fix: docker build? * fix: use ubuntu bionic * fix: get kivy installed * @ltcptgeneral can't spell * optim dockerfile for not installing unused packages * install basic stuff while building the container * use prebuilt image for development * install pylint on base image * rename and use new kivy * tests: added tests for Array and CorrelationTest Both are not working due to errors * use new thing * use 20.04 base * symlink pip3 to pip * use pip instead of pip3 * equation.Expression.py v 0.0.1-alpha added corresponding .pyc to .gitignore * parser.py v 0.0.2-alpha * added pyparsing to requirements.txt * parser v 0.0.4-alpha * Equation v 0.0.1-alpha * added Equation to tra_analysis imports * tests: New unit tests for submoduling (#66) * feat: created kivy gui boilerplate * migrated docker base image to debian Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * migrated to ubuntu Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed issues Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fix: docker build? * fix: use ubuntu bionic * fix: get kivy installed * @ltcptgeneral can't spell * optim dockerfile for not installing unused packages * install basic stuff while building the container * use prebuilt image for development * install pylint on base image * rename and use new kivy * tests: added tests for Array and CorrelationTest Both are not working due to errors * fix: Array no longer has *args and CorrelationTest functions no longer have self in the arguments * use new thing * use 20.04 base * symlink pip3 to pip * use pip instead of pip3 * tra_analysis v 2.1.0-alpha.2 SVM v 1.0.1 added unvalidated SVM unit tests Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed version number Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * tests: added tests for ClassificationMetric * partially fixed and commented out svm unit tests * fixed some SVM unit tests * added installing pytest to devcontainer.json * fix: small fixes to KNN Namely, removing self from parameters and passing correct arguments to KNeighborsClassifier constructor * fix, test: Added tests for KNN and NaiveBayes. Also made some small fixes in KNN, NaiveBayes, and RegressionMetric * test: finished unit tests except for StatisticalTest Also made various small fixes and style changes * StatisticalTest v 1.0.1 * fixed RegressionMetric unit test temporarily disabled CorrelationTest unit tests * tra_analysis v 2.1.0-alpha.3 * readded __all__ * fix: floating point issues in unit tests for CorrelationTest Co-authored-by: AGawde05 <agawde05@gmail.com> Co-authored-by: ltcptgeneral <learthurgo@gmail.com> Co-authored-by: Dev Singh <dev@devksingh.com> Co-authored-by: jzpan1 <panzhenyu2014@gmail.com> * fixed depreciated escape sequences * ficed tests, indent, import in test_analysis * changed version to 3.0.0 added backwards compatibility * ficed pytest install in container * removed GUI changes Signed-off-by: Arthur Lu <learthurgo@gmail.com> * incremented version to rc.1 (release candidate 1) Signed-off-by: Arthur Lu <learthurgo@gmail.com> * fixed NaiveBayes __changelog__ Signed-off-by: Arthur Lu <learthurgo@gmail.com> * fix: __setitem__ == to single = * Array v 1.0.1 * Revert "Array v 1.0.1" This reverts commit 59783b79f7451586bc9741794589e00f0c625348. * Array v 1.0.1 * Array.py v 1.0.2 added more Array unit tests * cleaned .gitignore tra_analysis v 3.0.0-rc2 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * added *.pyc to gitignore finished subdividing test_analysis * feat: gui layout + basic func * Froze and removed superscript (data-analysis) * remove data-analysis deps install for devcontainer * tukey pairwise comparison and multicomparison but no critical q-values * quick patch for devcontainer.json * better fix for devcontainer.json * fixed some styling in StatisticalTest removed print statement in StatisticalTest unit tests * update analysis tests to be more effecient * don't use loop for test_nativebayes * removed useless secondary docker files * tra-analysis v 3.0.0 Co-authored-by: James Pan <panzhenyu2014@gmail.com> Co-authored-by: AGawde05 <agawde05@gmail.com> Co-authored-by: zpan1 <72054510+zpan1@users.noreply.github.com> Co-authored-by: Dev Singh <dev@devksingh.com> Co-authored-by: = <=> Co-authored-by: Dev Singh <dsingh@imsa.edu> Co-authored-by: zpan1 <zpan@imsa.edu>
2021-04-29 00:33:50 +00:00
# Titan Robotics Team 2022: RandomForest submodule
# Written by Arthur Lu
# Notes:
# this should be imported as a python module using 'from tra_analysis import RandomForest'
# setup:
__version__ = "1.0.2"
tra-analysis v 3.0.0 aggregate PR (#73) * reflected doc changes to README.md Signed-off-by: Arthur Lu <learthurgo@gmail.com> * tra_analysis v 2.1.0-alpha.1 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * changed setup.py to use __version__ from source added Topic and keywords Signed-off-by: Arthur Lu <learthurgo@gmail.com> * updated Supported Platforms in README.md Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved required files back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved security back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved security back to parent moved contributing back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * add PR template Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved to parent folder Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved meta files to .github folder Signed-off-by: Arthur Lu <learthurgo@gmail.com> * Analysis.py v 3.0.1 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * updated test_analysis for submodules, and added missing numpy import in Sort.py * fixed item one of Issue #58 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * readded cache searching in postCreateCommand Signed-off-by: Arthur Lu <learthurgo@gmail.com> * added myself as an author * feat: created kivy gui boilerplate * added Kivy to requirements.txt Signed-off-by: Arthur Lu <learthurgo@gmail.com> * feat: gui with placeholders * fix: changed config.json path * migrated docker base image to debian Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * style: spaces to tabs * migrated to ubuntu Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed issues Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fix: docker build? * fix: use ubuntu bionic * fix: get kivy installed * @ltcptgeneral can't spell * optim dockerfile for not installing unused packages * install basic stuff while building the container * use prebuilt image for development * install pylint on base image * rename and use new kivy * tests: added tests for Array and CorrelationTest Both are not working due to errors * use new thing * use 20.04 base * symlink pip3 to pip * use pip instead of pip3 * equation.Expression.py v 0.0.1-alpha added corresponding .pyc to .gitignore * parser.py v 0.0.2-alpha * added pyparsing to requirements.txt * parser v 0.0.4-alpha * Equation v 0.0.1-alpha * added Equation to tra_analysis imports * tests: New unit tests for submoduling (#66) * feat: created kivy gui boilerplate * migrated docker base image to debian Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * migrated to ubuntu Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed issues Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fix: docker build? * fix: use ubuntu bionic * fix: get kivy installed * @ltcptgeneral can't spell * optim dockerfile for not installing unused packages * install basic stuff while building the container * use prebuilt image for development * install pylint on base image * rename and use new kivy * tests: added tests for Array and CorrelationTest Both are not working due to errors * fix: Array no longer has *args and CorrelationTest functions no longer have self in the arguments * use new thing * use 20.04 base * symlink pip3 to pip * use pip instead of pip3 * tra_analysis v 2.1.0-alpha.2 SVM v 1.0.1 added unvalidated SVM unit tests Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed version number Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * tests: added tests for ClassificationMetric * partially fixed and commented out svm unit tests * fixed some SVM unit tests * added installing pytest to devcontainer.json * fix: small fixes to KNN Namely, removing self from parameters and passing correct arguments to KNeighborsClassifier constructor * fix, test: Added tests for KNN and NaiveBayes. Also made some small fixes in KNN, NaiveBayes, and RegressionMetric * test: finished unit tests except for StatisticalTest Also made various small fixes and style changes * StatisticalTest v 1.0.1 * fixed RegressionMetric unit test temporarily disabled CorrelationTest unit tests * tra_analysis v 2.1.0-alpha.3 * readded __all__ * fix: floating point issues in unit tests for CorrelationTest Co-authored-by: AGawde05 <agawde05@gmail.com> Co-authored-by: ltcptgeneral <learthurgo@gmail.com> Co-authored-by: Dev Singh <dev@devksingh.com> Co-authored-by: jzpan1 <panzhenyu2014@gmail.com> * fixed depreciated escape sequences * ficed tests, indent, import in test_analysis * changed version to 3.0.0 added backwards compatibility * ficed pytest install in container * removed GUI changes Signed-off-by: Arthur Lu <learthurgo@gmail.com> * incremented version to rc.1 (release candidate 1) Signed-off-by: Arthur Lu <learthurgo@gmail.com> * fixed NaiveBayes __changelog__ Signed-off-by: Arthur Lu <learthurgo@gmail.com> * fix: __setitem__ == to single = * Array v 1.0.1 * Revert "Array v 1.0.1" This reverts commit 59783b79f7451586bc9741794589e00f0c625348. * Array v 1.0.1 * Array.py v 1.0.2 added more Array unit tests * cleaned .gitignore tra_analysis v 3.0.0-rc2 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * added *.pyc to gitignore finished subdividing test_analysis * feat: gui layout + basic func * Froze and removed superscript (data-analysis) * remove data-analysis deps install for devcontainer * tukey pairwise comparison and multicomparison but no critical q-values * quick patch for devcontainer.json * better fix for devcontainer.json * fixed some styling in StatisticalTest removed print statement in StatisticalTest unit tests * update analysis tests to be more effecient * don't use loop for test_nativebayes * removed useless secondary docker files * tra-analysis v 3.0.0 Co-authored-by: James Pan <panzhenyu2014@gmail.com> Co-authored-by: AGawde05 <agawde05@gmail.com> Co-authored-by: zpan1 <72054510+zpan1@users.noreply.github.com> Co-authored-by: Dev Singh <dev@devksingh.com> Co-authored-by: = <=> Co-authored-by: Dev Singh <dsingh@imsa.edu> Co-authored-by: zpan1 <zpan@imsa.edu>
2021-04-29 00:33:50 +00:00
__changelog__ = """changelog:
1.0.2:
- optimized imports
tra-analysis v 3.0.0 aggregate PR (#73) * reflected doc changes to README.md Signed-off-by: Arthur Lu <learthurgo@gmail.com> * tra_analysis v 2.1.0-alpha.1 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * changed setup.py to use __version__ from source added Topic and keywords Signed-off-by: Arthur Lu <learthurgo@gmail.com> * updated Supported Platforms in README.md Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved required files back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved security back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved security back to parent moved contributing back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * add PR template Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved to parent folder Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved meta files to .github folder Signed-off-by: Arthur Lu <learthurgo@gmail.com> * Analysis.py v 3.0.1 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * updated test_analysis for submodules, and added missing numpy import in Sort.py * fixed item one of Issue #58 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * readded cache searching in postCreateCommand Signed-off-by: Arthur Lu <learthurgo@gmail.com> * added myself as an author * feat: created kivy gui boilerplate * added Kivy to requirements.txt Signed-off-by: Arthur Lu <learthurgo@gmail.com> * feat: gui with placeholders * fix: changed config.json path * migrated docker base image to debian Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * style: spaces to tabs * migrated to ubuntu Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed issues Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fix: docker build? * fix: use ubuntu bionic * fix: get kivy installed * @ltcptgeneral can't spell * optim dockerfile for not installing unused packages * install basic stuff while building the container * use prebuilt image for development * install pylint on base image * rename and use new kivy * tests: added tests for Array and CorrelationTest Both are not working due to errors * use new thing * use 20.04 base * symlink pip3 to pip * use pip instead of pip3 * equation.Expression.py v 0.0.1-alpha added corresponding .pyc to .gitignore * parser.py v 0.0.2-alpha * added pyparsing to requirements.txt * parser v 0.0.4-alpha * Equation v 0.0.1-alpha * added Equation to tra_analysis imports * tests: New unit tests for submoduling (#66) * feat: created kivy gui boilerplate * migrated docker base image to debian Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * migrated to ubuntu Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed issues Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fix: docker build? * fix: use ubuntu bionic * fix: get kivy installed * @ltcptgeneral can't spell * optim dockerfile for not installing unused packages * install basic stuff while building the container * use prebuilt image for development * install pylint on base image * rename and use new kivy * tests: added tests for Array and CorrelationTest Both are not working due to errors * fix: Array no longer has *args and CorrelationTest functions no longer have self in the arguments * use new thing * use 20.04 base * symlink pip3 to pip * use pip instead of pip3 * tra_analysis v 2.1.0-alpha.2 SVM v 1.0.1 added unvalidated SVM unit tests Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed version number Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * tests: added tests for ClassificationMetric * partially fixed and commented out svm unit tests * fixed some SVM unit tests * added installing pytest to devcontainer.json * fix: small fixes to KNN Namely, removing self from parameters and passing correct arguments to KNeighborsClassifier constructor * fix, test: Added tests for KNN and NaiveBayes. Also made some small fixes in KNN, NaiveBayes, and RegressionMetric * test: finished unit tests except for StatisticalTest Also made various small fixes and style changes * StatisticalTest v 1.0.1 * fixed RegressionMetric unit test temporarily disabled CorrelationTest unit tests * tra_analysis v 2.1.0-alpha.3 * readded __all__ * fix: floating point issues in unit tests for CorrelationTest Co-authored-by: AGawde05 <agawde05@gmail.com> Co-authored-by: ltcptgeneral <learthurgo@gmail.com> Co-authored-by: Dev Singh <dev@devksingh.com> Co-authored-by: jzpan1 <panzhenyu2014@gmail.com> * fixed depreciated escape sequences * ficed tests, indent, import in test_analysis * changed version to 3.0.0 added backwards compatibility * ficed pytest install in container * removed GUI changes Signed-off-by: Arthur Lu <learthurgo@gmail.com> * incremented version to rc.1 (release candidate 1) Signed-off-by: Arthur Lu <learthurgo@gmail.com> * fixed NaiveBayes __changelog__ Signed-off-by: Arthur Lu <learthurgo@gmail.com> * fix: __setitem__ == to single = * Array v 1.0.1 * Revert "Array v 1.0.1" This reverts commit 59783b79f7451586bc9741794589e00f0c625348. * Array v 1.0.1 * Array.py v 1.0.2 added more Array unit tests * cleaned .gitignore tra_analysis v 3.0.0-rc2 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * added *.pyc to gitignore finished subdividing test_analysis * feat: gui layout + basic func * Froze and removed superscript (data-analysis) * remove data-analysis deps install for devcontainer * tukey pairwise comparison and multicomparison but no critical q-values * quick patch for devcontainer.json * better fix for devcontainer.json * fixed some styling in StatisticalTest removed print statement in StatisticalTest unit tests * update analysis tests to be more effecient * don't use loop for test_nativebayes * removed useless secondary docker files * tra-analysis v 3.0.0 Co-authored-by: James Pan <panzhenyu2014@gmail.com> Co-authored-by: AGawde05 <agawde05@gmail.com> Co-authored-by: zpan1 <72054510+zpan1@users.noreply.github.com> Co-authored-by: Dev Singh <dev@devksingh.com> Co-authored-by: = <=> Co-authored-by: Dev Singh <dsingh@imsa.edu> Co-authored-by: zpan1 <zpan@imsa.edu>
2021-04-29 00:33:50 +00:00
1.0.1:
- fixed __all__
1.0.0:
- ported analysis.RandomFores() here
- removed classness
"""
__author__ = (
"Arthur Lu <learthurgo@gmail.com>",
)
__all__ = [
"random_forest_classifier",
"random_forest_regressor",
]
import sklearn, sklearn.ensemble, sklearn.naive_bayes
tra-analysis v 3.0.0 aggregate PR (#73) * reflected doc changes to README.md Signed-off-by: Arthur Lu <learthurgo@gmail.com> * tra_analysis v 2.1.0-alpha.1 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * changed setup.py to use __version__ from source added Topic and keywords Signed-off-by: Arthur Lu <learthurgo@gmail.com> * updated Supported Platforms in README.md Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved required files back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved security back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved security back to parent moved contributing back to parent Signed-off-by: Arthur Lu <learthurgo@gmail.com> * add PR template Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved to parent folder Signed-off-by: Arthur Lu <learthurgo@gmail.com> * moved meta files to .github folder Signed-off-by: Arthur Lu <learthurgo@gmail.com> * Analysis.py v 3.0.1 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * updated test_analysis for submodules, and added missing numpy import in Sort.py * fixed item one of Issue #58 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * readded cache searching in postCreateCommand Signed-off-by: Arthur Lu <learthurgo@gmail.com> * added myself as an author * feat: created kivy gui boilerplate * added Kivy to requirements.txt Signed-off-by: Arthur Lu <learthurgo@gmail.com> * feat: gui with placeholders * fix: changed config.json path * migrated docker base image to debian Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * style: spaces to tabs * migrated to ubuntu Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed issues Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fix: docker build? * fix: use ubuntu bionic * fix: get kivy installed * @ltcptgeneral can't spell * optim dockerfile for not installing unused packages * install basic stuff while building the container * use prebuilt image for development * install pylint on base image * rename and use new kivy * tests: added tests for Array and CorrelationTest Both are not working due to errors * use new thing * use 20.04 base * symlink pip3 to pip * use pip instead of pip3 * equation.Expression.py v 0.0.1-alpha added corresponding .pyc to .gitignore * parser.py v 0.0.2-alpha * added pyparsing to requirements.txt * parser v 0.0.4-alpha * Equation v 0.0.1-alpha * added Equation to tra_analysis imports * tests: New unit tests for submoduling (#66) * feat: created kivy gui boilerplate * migrated docker base image to debian Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * migrated to ubuntu Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed issues Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fix: docker build? * fix: use ubuntu bionic * fix: get kivy installed * @ltcptgeneral can't spell * optim dockerfile for not installing unused packages * install basic stuff while building the container * use prebuilt image for development * install pylint on base image * rename and use new kivy * tests: added tests for Array and CorrelationTest Both are not working due to errors * fix: Array no longer has *args and CorrelationTest functions no longer have self in the arguments * use new thing * use 20.04 base * symlink pip3 to pip * use pip instead of pip3 * tra_analysis v 2.1.0-alpha.2 SVM v 1.0.1 added unvalidated SVM unit tests Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * fixed version number Signed-off-by: ltcptgeneral <learthurgo@gmail.com> * tests: added tests for ClassificationMetric * partially fixed and commented out svm unit tests * fixed some SVM unit tests * added installing pytest to devcontainer.json * fix: small fixes to KNN Namely, removing self from parameters and passing correct arguments to KNeighborsClassifier constructor * fix, test: Added tests for KNN and NaiveBayes. Also made some small fixes in KNN, NaiveBayes, and RegressionMetric * test: finished unit tests except for StatisticalTest Also made various small fixes and style changes * StatisticalTest v 1.0.1 * fixed RegressionMetric unit test temporarily disabled CorrelationTest unit tests * tra_analysis v 2.1.0-alpha.3 * readded __all__ * fix: floating point issues in unit tests for CorrelationTest Co-authored-by: AGawde05 <agawde05@gmail.com> Co-authored-by: ltcptgeneral <learthurgo@gmail.com> Co-authored-by: Dev Singh <dev@devksingh.com> Co-authored-by: jzpan1 <panzhenyu2014@gmail.com> * fixed depreciated escape sequences * ficed tests, indent, import in test_analysis * changed version to 3.0.0 added backwards compatibility * ficed pytest install in container * removed GUI changes Signed-off-by: Arthur Lu <learthurgo@gmail.com> * incremented version to rc.1 (release candidate 1) Signed-off-by: Arthur Lu <learthurgo@gmail.com> * fixed NaiveBayes __changelog__ Signed-off-by: Arthur Lu <learthurgo@gmail.com> * fix: __setitem__ == to single = * Array v 1.0.1 * Revert "Array v 1.0.1" This reverts commit 59783b79f7451586bc9741794589e00f0c625348. * Array v 1.0.1 * Array.py v 1.0.2 added more Array unit tests * cleaned .gitignore tra_analysis v 3.0.0-rc2 Signed-off-by: Arthur Lu <learthurgo@gmail.com> * added *.pyc to gitignore finished subdividing test_analysis * feat: gui layout + basic func * Froze and removed superscript (data-analysis) * remove data-analysis deps install for devcontainer * tukey pairwise comparison and multicomparison but no critical q-values * quick patch for devcontainer.json * better fix for devcontainer.json * fixed some styling in StatisticalTest removed print statement in StatisticalTest unit tests * update analysis tests to be more effecient * don't use loop for test_nativebayes * removed useless secondary docker files * tra-analysis v 3.0.0 Co-authored-by: James Pan <panzhenyu2014@gmail.com> Co-authored-by: AGawde05 <agawde05@gmail.com> Co-authored-by: zpan1 <72054510+zpan1@users.noreply.github.com> Co-authored-by: Dev Singh <dev@devksingh.com> Co-authored-by: = <=> Co-authored-by: Dev Singh <dsingh@imsa.edu> Co-authored-by: zpan1 <zpan@imsa.edu>
2021-04-29 00:33:50 +00:00
from . import ClassificationMetric, RegressionMetric
def random_forest_classifier(data, labels, test_size, n_estimators, criterion="gini", max_depth=None, min_samples_split=2, min_samples_leaf=1, min_weight_fraction_leaf=0.0, max_features="auto", max_leaf_nodes=None, min_impurity_decrease=0.0, min_impurity_split=None, bootstrap=True, oob_score=False, n_jobs=None, random_state=None, verbose=0, warm_start=False, class_weight=None):
data_train, data_test, labels_train, labels_test = sklearn.model_selection.train_test_split(data, labels, test_size=test_size, random_state=1)
kernel = sklearn.ensemble.RandomForestClassifier(n_estimators = n_estimators, criterion = criterion, max_depth = max_depth, min_samples_split = min_samples_split, min_samples_leaf = min_samples_leaf, min_weight_fraction_leaf = min_weight_fraction_leaf, max_leaf_nodes = max_leaf_nodes, min_impurity_decrease = min_impurity_decrease, bootstrap = bootstrap, oob_score = oob_score, n_jobs = n_jobs, random_state = random_state, verbose = verbose, warm_start = warm_start, class_weight = class_weight)
kernel.fit(data_train, labels_train)
predictions = kernel.predict(data_test)
return kernel, ClassificationMetric(predictions, labels_test)
def random_forest_regressor(data, outputs, test_size, n_estimators, criterion="mse", max_depth=None, min_samples_split=2, min_samples_leaf=1, min_weight_fraction_leaf=0.0, max_features="auto", max_leaf_nodes=None, min_impurity_decrease=0.0, min_impurity_split=None, bootstrap=True, oob_score=False, n_jobs=None, random_state=None, verbose=0, warm_start=False):
data_train, data_test, outputs_train, outputs_test = sklearn.model_selection.train_test_split(data, outputs, test_size=test_size, random_state=1)
kernel = sklearn.ensemble.RandomForestRegressor(n_estimators = n_estimators, criterion = criterion, max_depth = max_depth, min_samples_split = min_samples_split, min_weight_fraction_leaf = min_weight_fraction_leaf, max_features = max_features, max_leaf_nodes = max_leaf_nodes, min_impurity_decrease = min_impurity_decrease, min_impurity_split = min_impurity_split, bootstrap = bootstrap, oob_score = oob_score, n_jobs = n_jobs, random_state = random_state, verbose = verbose, warm_start = warm_start)
kernel.fit(data_train, outputs_train)
predictions = kernel.predict(data_test)
return kernel, RegressionMetric.RegressionMetric(predictions, outputs_test)