package main import ( "fmt" "syscall/js" wfa "wfa/pkg" ) func main() { c := make(chan bool) js.Global().Set("wfAlign", js.FuncOf(wfAlign)) js.Global().Set("DecodeCIGAR", js.FuncOf(DecodeCIGAR)) <-c } func wfAlign(this js.Value, args []js.Value) interface{} { if len(args) != 4 { fmt.Println("invalid number of args, requires 4: s1, s2, penalties, doCIGAR") return nil } if args[0].Type() != js.TypeString { fmt.Println("s1 should be a string") return nil } s1 := args[0].String() if args[1].Type() != js.TypeString { fmt.Println("s2 should be a string") return nil } s2 := args[1].String() if args[2].Type() != js.TypeObject { fmt.Println("penalties should be a map with key values m, x, o, e") return nil } if args[2].Get("m").IsUndefined() || args[2].Get("x").IsUndefined() || args[2].Get("o").IsUndefined() || args[2].Get("e").IsUndefined() { fmt.Println("penalties should be a map with key values m, x, o, e") return nil } m := args[2].Get("m").Int() x := args[2].Get("x").Int() o := args[2].Get("o").Int() e := args[2].Get("e").Int() penalties := wfa.Penalty{ M: m, X: x, O: o, E: e, } if args[3].Type() != js.TypeBoolean { fmt.Println("doCIGAR should be a boolean") return nil } doCIGAR := args[3].Bool() // Call the actual func. result := wfa.WFAlign(s1, s2, penalties, doCIGAR) resultMap := map[string]interface{}{ "score": result.Score, "CIGAR": result.CIGAR, } return js.ValueOf(resultMap) } func DecodeCIGAR(this js.Value, args []js.Value) interface{} { if len(args) != 1 { fmt.Println("invalid number of args, requires 1: CIGAR") return nil } if args[0].Type() != js.TypeString { fmt.Println("CIGAR should be a string") return nil } CIGAR := args[0].String() decoded := wfa.RunLengthDecode(CIGAR) return js.ValueOf(decoded) }